Is there a retrospective on AlphaFold you’d recommend? Maybe that’s the insight I’m missing, I didn’t realize it had broad identifiable gaps like that.

Here's one: https://www.orbion.life/blog/alphafold-s-limitations-what-it...

I see similar conceptual gaps in coding agents when I work with them, even Astra and Fable, so maybe this a is decent proxy to describe the gap between hype and reality.