Some OCR solutions do change the original file, like OCRmyPDF. They take layers that were just images before and replace it with text layers so that you can search the document.

That isn't OCR, but an application of the resulting output of OCR. Again, a signature on a PDF or any type of file doesn't prevent you from reading it. (It also doesn't technically prevent you from changing it, it just enables the detection of changes to a particular file.)

There's nothing about PDFs or image formats that prevent anyone from doing OCR. The reason construction documents are difficult to OCR is because OCR models are not well trained for them, and they're very technical documents where small details are significant. It doesn't have anything to do with the file format