I think it does indeed make a lot of sense in the particular example given.

But what if we add 2 extra nodes: n5 dependent on n2 alone, and n6 dependent on n3 alone? Should we keep n2 and n3 separate and split n4, or should we merge n2 and n3 and keep n4, or should we keep the topology as it is?

The same sort of problem arises in a class inheritance graph: it would make sense to merge classes n2 and n3 if n4 is the only class inheriting from it, but if you add more nodes, then the simplification might not be possible anymore.