Physics didn’t pick sinusoids because it “only knows about sinuses.” Physics picked them because the math forces them on you.
Actual engineers:
- use sinusoids because LTI systems respond, uh... linearly to them
- use square waves for digital logic
- use triangle waves for modulation
- use wavelets for compression or time/frequency localization
- use Hilbert transforms (and actually know what "orthonormal" means)
- use STFT, CWT, FFTs... and know exactly why Fourier works and when it breaks