Correct. I avoid autotools and cmake as much as I can. I'd better write Makefiles by hand. But when I need to deal with them, I'd prefer cmake. I can can modify CMakeLists.txt in a meaningful way and get the results I want. I wouldn't touch autotools build system because I never was able to figure out which of the files is the configuration that is meant to be edited by hands and not generated by scripts in other files. I tried to dig the documentation but I never made it.